Journal of Biology ›› 2025, Vol. 42 ›› Issue (2): 7-.doi: 10.3969/j.issn.2095-1736.2025.02.007

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In vitro spontaneous conformational transitions between G-quadruplexes formed by the guanine-rich DNA fragment d(G3AG3T2G3A2G3)upstream of promoter E1 in the human proto-oncogene c-fms

LIU Zhiyue1,2, JING Haitao2, ZHU Ting1,2, FU Wenqiang2, ZHANG Na2, HU Wenxuan2   

  1. 1. Institutes of Physical Science and Information Technology, Anhui University, Hefei 230601, China; 2. High
    Magnetic Field Laboratory, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, China
  • Online:2025-04-18 Published:2025-04-14

Abstract: F3g is a short DNA fragment, d(G3AG3T2G3A2G3), locating upstream of promoter E1 in the human proto-oncogenec-fms. Nuclear magnetic resonance (NMR) studies have revealed that, in near-physiological K+solutions, F3g folds into two distinct G-quadruplex structures with a spontaneous folding topology switch. Subsequent validations using a combination of techniques including NMR, CD, and PAGE have demonstrated that the kinetically favored Form 1 structure was a non-parallel two-tetrad G-quadruplex, while the thermodynamically stable Form 2 structure consisted of a stack of two parallel three-tetrad G-quadruplexes. These findings provided insights and a theoretical basis for further understanding the expression regulation of the human proto-oncogenec-fmsand the targeted treatment of related diseases.

Key words: human oncogenec-fms, DNA G-quadruplex, spontaneous structural switch, NMR, CD

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