生物学杂志 ›› 2025, Vol. 42 ›› Issue (3): 29-.doi: 10.3969/j.issn.2095-1736.2025.03.029

• 研究报告 • 上一篇    下一篇

柴达木盆地西台吉乃尔盐湖一株耐盐细菌的分离及其基因组分析

胡苗苗, 魏 青, 陈家瑞, 刘子花, 晏宇杰, 徐 荣   

  1. 青海大学 生态环境工程学院, 西宁 810016
  • 出版日期:2025-06-18 发布日期:2025-06-16
  • 通讯作者: 徐荣,博士,讲师,主要从事环境微生物研究,E-mail:xurong123456.ok@163.com
  • 作者简介:胡苗苗,硕士,研究方向为盐湖微生物,E-mail:2643127084@qq.com
  • 基金资助:
    青海省自然科学基金项目(2022-ZJ-952Q)

Isolation and genomic sequence analysis of a salt-tolerant strain from West Taijinaier salt lake of Qaidam Basin

HU Miaomiao, WEI Qing, CHEN Jiarui, LIU Zihua, YAN Yujie, XU Rong   

  1. School of Ecological and Environmental Engineering, Qinghai University, Xining 810016, China
  • Online:2025-06-18 Published:2025-06-16

摘要: 从柴达木盆地西台吉乃尔盐湖采集样品进行耐盐微生物富集培养、分离纯化,对菌株进行耐盐能力测试及全基因组测序,挖掘其基因组中与盐耐受相关的基因。分离到一株耐盐细菌,经16S rRNA基因测序,比对该菌株与Bacillus atrophaeus的相似性达99.79%,将菌株命名为Bacillus atrophaeus W-4。在不同NaCl质量浓度梯度下测定菌株生长曲线探究菌株NaCl耐受性,结果显示该菌株最高耐受0.25 kg/L NaCl,是一株中度耐盐细菌。基因组测序分析显示,菌株W-4含1个染色体基因组,大小为4284607 bp。KEGG数据库注释分析发现,菌株基因组中有多种与NaCl耐受可能相关的基因,其中,与编码Na+转运体相关的基因有5个,与K+转运体相关的基因有7个,与相容性溶质相关的基因有37个,与分子伴侣相关的基因有5个。研究结果表明,菌株W-4在遗传水平具备适应高盐环境的潜力,将为后续该耐盐菌株的应用研究提供一定的理论基础。

关键词: 极端环境, 盐湖微生物, 芽孢杆菌, 全基因组测序, 耐盐基因

Abstract: In this study, sediment samples were collected from the West Taijiner salt Lake in the Qaidam Basin for enrichment, culture, isolation and purification of salt-tolerant microorganisms, and the salt tolerance ability of the strains was tested and whole genome sequence was carried out. Genes and pathways related to salt tolerance in the genome were excavated. A strain of salt-tolerant bacterium was isolated and blasted having 99.79% similarity with Bacillus atrophaeus according to 16S rRNA gene sequence analysis. It was named as Bacillus atrophaeus W-4. The growth curves of W-4 were measured under different NaCl mass concentration gradients to explore its tolerance to NaCl, and the results showed that the strain W-4 could tolerate up to 0.25 kg/L NaCl. It was a moderately halotolerant bacterium. Genome sequence analysis showed that W-4 contained one chromosomal genome with a size of 4284607 bp. According to the annotation analysis of KEGG database, it was found that there were a variety of genes that might be related to NaCl tolerance in the genome of strain W-4, including 5 genes related to Na+ transporter, 7 genes related to K+ transporter, 37 genes associated with compatibility solutes, and 5 genes associated with chaperones. The results indicated that strain W-4 had the potential to adapt to high-salt environment at the genetic level, and this study will provide a theoretical basis for the application of the salt-tolerant strain.

Key words: extreme environment, salt lake microorganisms;Bacillus, whole genome sequencing, salt tolerance genes

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