生物学杂志 ›› 2021, Vol. 38 ›› Issue (3): 42-.doi: 10.3969/j.issn.2095-1736.2021.03.042

• 研究报告 • 上一篇    下一篇

决明胰蛋白酶抑制剂的同源建模与定点突变

  

  1. 西南交通大学生命科学与工程学院, 成都610031
  • 出版日期:2021-06-18 发布日期:2021-06-21
  • 通讯作者: 廖 海,博士,副教授,主要从事生物技术研究,E-mail: ddliaohai@aliyun.com; 周嘉裕,博士,副教授,主要从事生物技术研究,E-mail: spinezhou@aliyun.com
  • 作者简介:李超林,硕士,研究方向为结构生物学,E-mail: 840986540@qq.com
  • 基金资助:
    国家自然科学基金项目(31500276);四川省应用基础研究项目(2017JY0222);四川省重点研发项目(2018SZ0061);成都市科技惠民技术研发项目(2016-HM01-00260-SF)

Homology modeling and site-directed mutagenesis of Cassia obtusifolia trypsin inhibitor

  1. School of Life Science and Engineering, Southwest Jiaotong University, Chengdu 610031, China
  • Online:2021-06-18 Published:2021-06-21

摘要: 决明胰蛋白酶抑制剂(Cassia obtusifolia trypsin inhibitor,CoTI)是植物Kunitz蛋白酶抑制剂家族的一个成员,对胰蛋白酶具有较强的抑制活性。利用同源建模预测CoTI的三维模型,发现其形成了β-三叶草型三维结构,由底部的β-桶与顶部的盖子区域组成。通过氨基酸序列和三维模型比对,发现CoTI含有一个保守的Trp114残基,该残基位于盖子区域,与β-桶的Leu98和Ser137形成氢键,其侧链伸向Barrel,和Val68、Leu98、Phe100等形成疏水作用,推测其在β-三叶草型三维结构的形成与稳定中发挥重要作用。使用定点突变技术将Trp114残基突变为Ala残基后,相比于野生型CoTI, CoTI Trp114Ala突变体对牛胰蛋白酶和菜青虫中肠类胰蛋白酶的抑制活性分别下降63.4%和62.0%,证明Trp114残基对发挥CoTI抑制活性的重要性。结果为CoTI的结构-功能研究及相关的应用奠定理论基础。

关键词: 决明, 胰蛋白酶抑制剂, 同源建模, 疏水核心, 定点突变

Abstract: Cassia obtusifolia trypsin inhibitor (CoTI), a member of plant Kunitz protease inhibitor family, shows strong inhibitory activity against trypsin. In this paper, the three-dimensional model of CoTI was predicted by homologous modeling. The model adopted a β-trefoil fold with β-barrel at the bottom and the lid at the top. Then, compared with the amino acid sequences and three-dimensional structures of various Kunitz protease inhibitors, a conserved Trp114 that was located in the lid region and extended to the β-barrel was found in the CoTI model. Since Trp114 formed hydrogen bonds with Leu98 and Ser137, hydrophobic interaction with Val68, Leu98 and Phe100, it was suggested to play an important role in the formation and stability of β-trefoil fold. After mutation of Trp114 residue to Ala residue using site-directed mutagenesis technique, the inhibitory activities of Trp114Ala mutant against bovine trypsin and Pierisrapae midgut trypsin were decreased by 63.4% and 62.0%, respectively. As a result, the importance of Trp114 would lay a theoretical foundation for the study of structure-function of CoTI and its related applications.

Key words: Cassia obtusifolia, trypsin inhibitor, homology modeling, hydrophobic core, site-directed mutation

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