Journal of Biology ›› 2025, Vol. 42 ›› Issue (5): 46-.doi: 10.3969/j.issn.2095-1736.2025.05.046

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Effect of miR-556 on the growth of human glioblastoma cells and its transcriptome analysis

XING Libo1, CHAI Chun’e2, WANG Erhong2, WANG Ziyan1, LU Dongdong1   

  1. 1. School of Life Sciences and Technology, Tongji University, Shanghai 200092, China;
    2. School of Medicine, Tongji University, Shanghai 200331, China
  • Online:2025-10-18 Published:2025-10-14

Abstract: This study investigated how miR-556 affects proliferation, genome-wide transcription and gene-function networks in human glioblastoma U-87 MG cells. A miR-556-overexpressing line was generated by lentiviral transduction and puromycin selection; precursor and mature miR-556 levels were quantified by qRT-PCR and standard RT-PCR. Cell proliferation and clonogenic capacity were assessed with CCK-8 and crystal-violet assays, respectively. RNA-seq was used to map transcriptional and pathway changes. Relative to the control (rLV) group, the miR-556-overexpressing (rLV-miR-556) group exhibited significantly increasedin vitroproliferation and colony formation (P<0.01). RNA-seq revealed 2028 differentially expressed genes (165 up- and 1863 down-regulated) between the two groups. miR-556 up-regulatedHMOX1,SERPINB2andATOH8while down-regulatingMACF1,PEG10andHIF1A, thereby modulating pathways related to gene transcription, transmembrane transport, RNA polymerase Ⅱ activity, post-translational modification, protein metabolism, immune responses and disease-related pathways. These findings indicate that miR-556 enhances glioblastoma cell growth and reshapes the transcriptional landscape, providing a basis for future intervention strategies.

Key words: MiR-556, human glioblastoma cells, lentivirus expression plasmid, cell proliferation, transcriptomics

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